19401601 Lecture

SoSe 16: Sequenzanalyse

Knut Reinert

Additional information / Pre-requisites

Elective course (compulsory optional) for Master students in bioinformatics.

Comments

Goals:

The students will gain a deeper unterstanding for basic algorithmic concepts for the analysis of genomic sequencing related to state of the art research in bioinformatics and biotechnology. They will learn various paradigms for the approximate search. They will know which algorithms should be preferred under what circumstances and are able to grasp key concepts of scientific publications related to this field.

Some examples of subjects that will be more deeply discussed:
- Paradigms for approximative, semiglobal alignments (read mapping)
- Methods for genomic assembly and metagenomic assembly
- Methods for the identification of genetic variants (SNVs, SNPs, CNVs) - algorithmic problems of quantifying expession using NGS data

Find more information on: https://kvv.imp.fu-berlin.de/portal/

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14 Class schedule

Regular appointments

Tue, 2016-04-19 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-04-26 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-05-03 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-05-10 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-05-17 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-05-24 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-05-31 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-06-07 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-06-14 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-06-21 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-06-28 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-07-05 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-07-12 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Tue, 2016-07-19 10:00 - 12:00

Lecturers:
Univ.-Prof. Dr. Knut Reinert

Location:
T9/051 Seminarraum (Takustr. 9)

Subjects A - Z