20122901 Lecture

WiSe 22/23: Computational Molecular Physics

Cecilia Clementi

Comments

This course discusses modern methods for simulations of molecular systems, with examples and applications.

Topics:

  • force-fields
  • integrators
  • electrostatic treatment
  • implicit & explicit solvent methods
  • simulations in different thermodynamic ensembles
  • Molecular Dynamics
  • Langevin Dynamics
  • Equilibrium data analysis, kinetics
  • Enhanced Sampling
  • Free energy perturbation 
  • coarse-graining
  • machine-learning methods
  • exploration of free energy landscapes
  • Normal Mode Analysis
  • Monte Carlo simulations
  • parallel tempering 

Requirements

  • Basic knowledge of statistical mechanics
  • Basic programming in python or related 

The first part of the course is also offered within the module „Molecular simulation I“ of the Master’s program in Computational Sciences.

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32 Class schedule

Regular appointments

Mon, 2022-10-17 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2022-10-24 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2022-10-31 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2022-11-07 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2022-11-14 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2022-11-21 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2022-11-28 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2022-12-05 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2022-12-12 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2023-01-02 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2023-01-09 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2023-01-16 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2023-01-23 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2023-01-30 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2023-02-06 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Mon, 2023-02-13 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2022-10-19 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2022-10-26 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2022-11-02 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2022-11-09 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2022-11-16 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2022-11-23 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2022-11-30 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2022-12-07 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2022-12-14 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2023-01-04 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2023-01-11 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2023-01-18 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2023-01-25 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2023-02-01 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2023-02-08 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

Wed, 2023-02-15 12:00 - 14:00

Lecturers:
Univ.-Prof. Dr. Cecilia Clementi

Location:
0.1.01 Hörsaal B (Arnimallee 14)

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